Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | CD58_RS09285 | Not Available | Negative | 2143429 - 2143869 | 16251.7 |
| hypothetical protein | CD58_RS09290 | Not Available | Positive | 2143972 - 2144409 | 16752.4 |
| fatty acid oxidation complex subunit alpha fadb | CD58_RS09295 | Not Available | Positive | 2144898 - 2147045 | 77557.4 |
| acetyl-coa c-acyltransferase fada | CD58_RS09300 | Not Available | Positive | 2147076 - 2148251 | 41683.7 |
| duf1653 domain-containing protein | CD58_RS09305 | Not Available | Positive | 2148359 - 2148595 | 9134.74 |
| type i dna topoisomerase | CD58_RS09310 | Not Available | Positive | 2148711 - 2151323 | 97018.9 |
| duf6586 family protein | CD58_RS09315 | Not Available | Positive | 2151561 - 2152085 | 19401.2 |
| hypothetical protein | CD58_RS29145 | Not Available | Positive | 2152192 - 2152425 | 8552.28 |
| sos-induced cell division inhibitor sula | CD58_RS09325 | Not Available | Negative | 2152499 - 2152972 | 17319.9 |
| transcriptional repressor lexa | CD58_RS09330 | Not Available | Negative | 2152983 - 2153591 | 22258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
