Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | CD58_RS09235 | Not Available | Negative | 2128462 - 2129250 | 28595.9 |
| aconitate hydratase acna | CD58_RS09240 | Not Available | Negative | 2129375 - 2132116 | 99516.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | CD58_RS09245 | Not Available | Positive | 2132289 - 2133362 | 40320.8 |
| sulfurtransferase tusa | CD58_RS09250 | Not Available | Positive | 2133549 - 2133800 | 9324.3 |
| mate family efflux transporter | CD58_RS09255 | Not Available | Negative | 2133797 - 2135200 | 49412.1 |
| 4-phosphoerythronate dehydrogenase pdxb | CD58_RS09260 | Not Available | Positive | 2135525 - 2136667 | 41718.9 |
| pa1571 family protein | CD58_RS09265 | Not Available | Negative | 2136859 - 2137038 | 6657.94 |
| abc transporter transmembrane domain-containing protein | CD58_RS09270 | Not Available | Positive | 2137289 - 2139070 | 64606.0 |
| transglycosylase slt domain-containing protein | CD58_RS09275 | Not Available | Negative | 2139240 - 2141168 | 73792.6 |
| atp-binding cassette domain-containing protein | CD58_RS09280 | Not Available | Positive | 2141382 - 2143295 | 70147.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
