Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit iii | CD58_RS09185 | Not Available | Negative | 2118944 - 2119927 | 35342.0 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | CD58_RS09190 | Not Available | Negative | 2119924 - 2120109 | 6763.24 |
| cytochrome-c oxidase, cbb3-type subunit ii | CD58_RS09195 | Not Available | Negative | 2120114 - 2120722 | 22530.2 |
| cytochrome-c oxidase, cbb3-type subunit i | CD58_RS09200 | Not Available | Negative | 2120722 - 2122164 | 53368.5 |
| cytochrome-c oxidase, cbb3-type subunit iii | CD58_RS09205 | Not Available | Negative | 2122660 - 2123613 | 33917.4 |
| cbb3-type cytochrome oxidase subunit 3 | CD58_RS09210 | Not Available | Negative | 2123610 - 2123813 | 7352.97 |
| cytochrome-c oxidase, cbb3-type subunit ii | CD58_RS09215 | Not Available | Negative | 2123817 - 2124425 | 22681.4 |
| cytochrome-c oxidase, cbb3-type subunit i | CD58_RS09220 | Not Available | Negative | 2124436 - 2125860 | 52857.1 |
| alpha/beta family hydrolase | CD58_RS09225 | Not Available | Positive | 2125957 - 2126643 | 24910.0 |
| methyl-accepting chemotaxis protein | CD58_RS09230 | Not Available | Negative | 2126819 - 2128384 | 57210.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
