Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS09090 | Not Available | Positive | 2095211 - 2096953 | 65218.4 |
| substrate-binding periplasmic protein | CD58_RS09095 | Not Available | Negative | 2096905 - 2097672 | 28354.1 |
| dna polymerase iii subunit gamma/tau | CD58_RS09100 | Not Available | Positive | 2097815 - 2099881 | 75021.5 |
| ybab/ebfc family nucleoid-associated protein | CD58_RS09105 | Not Available | Positive | 2099946 - 2100284 | 12049.8 |
| nadp-dependent oxidoreductase | CD58_RS09110 | Not Available | Positive | 2100573 - 2101607 | 36854.6 |
| recombination mediator recr | CD58_RS09115 | Not Available | Positive | 2101674 - 2102276 | 21410.0 |
| adenine phosphoribosyltransferase | CD58_RS09120 | Not Available | Negative | 2102402 - 2102950 | 20084.4 |
| fumarate/nitrate reduction transcriptional regulator fnr | CD58_RS09125 | Not Available | Negative | 2103036 - 2103770 | 27170.8 |
| oxygen-independent coproporphyrinogen iii oxidase | CD58_RS09130 | Not Available | Negative | 2103865 - 2105247 | 52502.6 |
| sulfite exporter taue/safe family protein | CD58_RS09135 | Not Available | Negative | 2105444 - 2106127 | 24184.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
