Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase molybdopterin binding subunit | CD58_RS09045 | Not Available | Negative | 2080204 - 2082603 | 87578.4 |
| xanthine dehydrogenase small subunit | CD58_RS09050 | Not Available | Negative | 2082596 - 2084050 | 53166.6 |
| gntr family transcriptional regulator | CD58_RS09055 | Not Available | Positive | 2084444 - 2085103 | 24805.2 |
| chromosome segregation protein smc | CD58_RS09060 | Not Available | Positive | 2085106 - 2088594 | 131084.0 |
| cell division protein zipa | CD58_RS09065 | Not Available | Positive | 2088853 - 2089698 | 31323.1 |
| nad-dependent dna ligase liga | CD58_RS09070 | Not Available | Positive | 2089830 - 2092193 | 85867.7 |
| putative zinc-binding metallopeptidase | CD58_RS09075 | Not Available | Positive | 2092270 - 2093430 | 44071.1 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 2093556 - 2093651 | Not Available |
| duf4823 domain-containing protein | CD58_RS09080 | Not Available | Negative | 2093847 - 2094353 | 18422.1 |
| helix-turn-helix domain-containing protein | CD58_RS09085 | Not Available | Negative | 2094556 - 2094870 | 11444.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
