Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | CD58_RS09000 | Not Available | Positive | 2066396 - 2067415 | 35733.4 |
| ribosome modulation factor | CD58_RS29135 | Not Available | Negative | 2067755 - 2067970 | 8112.72 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | CD58_RS09005 | Not Available | Positive | 2068502 - 2070772 | 85155.9 |
| ggdef domain-containing protein | CD58_RS09010 | Not Available | Positive | 2070918 - 2073305 | 88038.4 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | CD58_RS09015 | Not Available | Negative | 2073454 - 2074920 | 52448.3 |
| yggl family protein | CD58_RS09020 | Not Available | Positive | 2075154 - 2075498 | 12825.2 |
| benzoate/h(+) symporter bene family transporter | CD58_RS09025 | Not Available | Negative | 2075591 - 2076781 | 41135.9 |
| gntr family transcriptional regulator | CD58_RS09030 | Not Available | Positive | 2077025 - 2077789 | 28129.6 |
| guanine deaminase | CD58_RS09035 | Not Available | Negative | 2077920 - 2079224 | 47957.2 |
| xanthine dehydrogenase accessory protein xdhc | CD58_RS09040 | Not Available | Negative | 2079244 - 2080086 | 30677.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
