Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cox15/ctaa family protein | CD58_RS00470 | Not Available | Negative | 100434 - 101513 | 38828.4 |
| hypothetical protein | CD58_RS00475 | Not Available | Negative | 101524 - 102117 | 21884.4 |
| surf1 family protein | CD58_RS00480 | Not Available | Negative | 102083 - 102820 | 27523.9 |
| twin transmembrane helix small protein | CD58_RS00485 | Not Available | Positive | 102891 - 103094 | 7115.03 |
| cytochrome c oxidase subunit 3 | CD58_RS00490 | Not Available | Negative | 103103 - 103990 | 33162.8 |
| cytochrome c oxidase assembly protein | CD58_RS00495 | Not Available | Negative | 104015 - 104566 | 20594.1 |
| cytochrome c oxidase subunit i | CD58_RS00500 | Not Available | Negative | 104689 - 106281 | 58647.8 |
| cytochrome c oxidase subunit ii | CD58_RS00505 | Not Available | Negative | 106364 - 107491 | 42168.0 |
| hypothetical protein | CD58_RS00510 | Not Available | Positive | 107865 - 108515 | 24132.7 |
| sulp family inorganic anion transporter | CD58_RS00515 | Not Available | Negative | 108779 - 110311 | 53706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
