Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigx | CD58_RS08950 | Not Available | Positive | 2052446 - 2053036 | 23242.0 |
| ompa family protein | CD58_RS08955 | Not Available | Positive | 2053144 - 2054178 | 36649.0 |
| uroporphyrinogen-iii c-methyltransferase | CD58_RS08960 | Not Available | Negative | 2054378 - 2055133 | 26219.8 |
| nitrate reductase | CD58_RS08965 | Not Available | Negative | 2055145 - 2057862 | 98788.2 |
| nitrite reductase small subunit nird | CD58_RS08970 | Not Available | Negative | 2057862 - 2058179 | 11473.7 |
| nitrite reductase large subunit nirb | CD58_RS08975 | Not Available | Negative | 2058176 - 2060629 | 89791.1 |
| bifunctional protein-serine/threonine kinase/phosphatase | CD58_RS08980 | Not Available | Negative | 2061045 - 2062715 | 61639.7 |
| nitrate/nitrite transporter | CD58_RS08985 | Not Available | Negative | 2062725 - 2063936 | 42592.8 |
| antar domain-containing response regulator | CD58_RS08990 | Not Available | Negative | 2064340 - 2064915 | 21562.6 |
| cmpa/nrta family abc transporter substrate-binding protein | CD58_RS08995 | Not Available | Negative | 2064930 - 2066141 | 44066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
