Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CD58_RS08895 | Not Available | Positive | 2042575 - 2043096 | 19295.3 |
| aspartate aminotransferase family protein | CD58_RS08900 | Not Available | Positive | 2043199 - 2044611 | 50424.4 |
| mbth family protein | CD58_RS08905 | Not Available | Positive | 2044696 - 2044923 | 8836.48 |
| pyruvate, water dikinase regulatory protein | CD58_RS08910 | Not Available | Negative | 2045061 - 2045879 | 31024.8 |
| phosphoenolpyruvate synthase | CD58_RS08920 | Not Available | Positive | 2046056 - 2048431 | 86017.0 |
| alpha/beta fold hydrolase | CD58_RS08925 | Not Available | Positive | 2048589 - 2049578 | 36442.5 |
| ribonuclease e activity regulator rraa | CD58_RS08930 | Not Available | Positive | 2049705 - 2050196 | 17661.2 |
| zinc transporter zntb | CD58_RS08935 | Not Available | Positive | 2050222 - 2051217 | 38021.0 |
| hypothetical protein | CD58_RS08940 | Not Available | Positive | 2051282 - 2051527 | 8859.6 |
| mechanosensitive ion channel family protein | CD58_RS08945 | Not Available | Positive | 2051530 - 2052354 | 29117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
