Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | CD58_RS08845 | Not Available | Positive | 2019943 - 2020719 | 29156.8 |
| gnat family n-acetyltransferase | CD58_RS08850 | Not Available | Positive | 2020789 - 2021802 | 39293.8 |
| rna polymerase factor sigma-70 | CD58_RS08855 | Not Available | Negative | 2021940 - 2022488 | 20545.7 |
| non-ribosomal peptide synthetase | CD58_RS08860 | Not Available | Positive | 2022760 - 2035746 | 478453.0 |
| alpha/beta fold hydrolase | CD58_RS08865 | Not Available | Positive | 2035941 - 2036747 | 29748.9 |
| thiol:disulfide interchange protein dsbg | CD58_RS08870 | Not Available | Negative | 2036929 - 2037696 | 27948.9 |
| tlpa family protein disulfide reductase | CD58_RS08875 | Not Available | Negative | 2037672 - 2038541 | 31396.0 |
| protein-disulfide reductase dsbd | CD58_RS08880 | Not Available | Negative | 2038541 - 2040271 | 61687.6 |
| response regulator | CD58_RS08885 | Not Available | Positive | 2040447 - 2041127 | 24625.6 |
| atp-binding protein | CD58_RS08890 | Not Available | Positive | 2041124 - 2042449 | 48289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
