Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS31390 | Not Available | Negative | 2011877 - 2012185 | 11444.8 |
| lipid kinase yegs | CD58_RS08800 | Not Available | Positive | 2012532 - 2013449 | 31988.5 |
| response regulator | CD58_RS08805 | Not Available | Negative | 2013433 - 2014092 | 24299.8 |
| sensor histidine kinase | CD58_RS08810 | Not Available | Negative | 2014089 - 2014982 | 33299.7 |
| hypothetical protein | CD58_RS08815 | Not Available | Negative | 2015216 - 2015686 | 17186.4 |
| chemotaxis protein chev | CD58_RS08820 | Not Available | Positive | 2016169 - 2017092 | 34323.1 |
| mosc domain-containing protein | CD58_RS08825 | Not Available | Positive | 2017164 - 2017973 | 29569.5 |
| pyrimidine/purine nucleoside phosphorylase | CD58_RS08830 | Not Available | Negative | 2018040 - 2018324 | 10180.0 |
| exonuclease domain-containing protein | CD58_RS08835 | Not Available | Negative | 2018417 - 2018959 | 20797.0 |
| tetr/acrr family transcriptional regulator | CD58_RS08840 | Not Available | Positive | 2019201 - 2019824 | 23245.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
