Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqjd family protein | CD58_RS08745 | Not Available | Negative | 2003623 - 2003937 | 11422.5 |
| ammonium transporter | CD58_RS08750 | Not Available | Positive | 2004278 - 2005486 | 42169.9 |
| cation:proton antiporter | CD58_RS08755 | Not Available | Negative | 2005495 - 2007207 | 61424.6 |
| glutaredoxin family protein | CD58_RS08760 | Not Available | Positive | 2007397 - 2007636 | 9086.12 |
| transcriptional regulator | CD58_RS08765 | Not Available | Positive | 2007728 - 2008048 | 12084.5 |
| pseudouridine synthase | CD58_RS08770 | Not Available | Positive | 2008120 - 2009010 | 33899.6 |
| ygdi/ygdr family lipoprotein | CD58_RS08775 | Not Available | Negative | 2009089 - 2009310 | 8097.59 |
| molybdenum cofactor guanylyltransferase moba | CD58_RS08780 | Not Available | Negative | 2009386 - 2009988 | 22045.5 |
| molybdenum cofactor biosynthesis protein b | CD58_RS08785 | Not Available | Positive | 2010067 - 2010606 | 19049.8 |
| gephyrin-like molybdotransferase glp | CD58_RS08790 | Not Available | Positive | 2010629 - 2011816 | 42171.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
