Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | CD58_RS08695 | Not Available | Positive | 1989287 - 1989748 | 17211.0 |
| response regulator | CD58_RS08700 | Not Available | Negative | 1989732 - 1992053 | 85114.8 |
| atp-binding protein | CD58_RS08705 | Not Available | Positive | 1992217 - 1993107 | 33679.1 |
| gaf domain-containing protein | CD58_RS08710 | Not Available | Positive | 1993104 - 1993586 | 17314.5 |
| hd domain-containing phosphohydrolase | CD58_RS08715 | Not Available | Negative | 1993587 - 1996535 | 109571.0 |
| transporter substrate-binding domain-containing protein | CD58_RS08720 | Not Available | Negative | 1996654 - 2000274 | 133818.0 |
| response regulator transcription factor | CD58_RS08725 | Not Available | Negative | 2000286 - 2000912 | 23369.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | CD58_RS08730 | Not Available | Negative | 2001357 - 2002685 | 49819.5 |
| hypothetical protein | CD58_RS08735 | Not Available | Negative | 2002899 - 2003234 | 12567.8 |
| phage holin family protein | CD58_RS08740 | Not Available | Negative | 2003231 - 2003620 | 13993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
