Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grea/greb family elongation factor | CD58_RS08590 | Not Available | Negative | 1970139 - 1970621 | 17569.0 |
| metal abc transporter atp-binding protein | CD58_RS08595 | Not Available | Negative | 1970624 - 1971009 | 13733.7 |
| elongation factor p maturation arginine rhamnosyltransferase earp | CD58_RS08600 | Not Available | Positive | 1971131 - 1972264 | 43203.4 |
| elongation factor p | CD58_RS08605 | Not Available | Positive | 1972313 - 1972882 | 21167.2 |
| alpha/beta hydrolase | CD58_RS08610 | Not Available | Negative | 1972971 - 1973984 | 35999.2 |
| organic hydroperoxide resistance protein | CD58_RS08615 | Not Available | Negative | 1974021 - 1974440 | 14246.8 |
| marr family winged helix-turn-helix transcriptional regulator | CD58_RS08620 | Not Available | Negative | 1974836 - 1975297 | 17289.2 |
| sulfite exporter taue/safe family protein | CD58_RS08625 | Not Available | Positive | 1975442 - 1976191 | 26257.1 |
| lysr substrate-binding domain-containing protein | CD58_RS08630 | Not Available | Negative | 1976181 - 1977035 | 32037.9 |
| duf1127 domain-containing protein | CD58_RS08635 | Not Available | Positive | 1977133 - 1977351 | 8380.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
