Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | CD58_RS08540 | Not Available | Positive | 1961678 - 1962283 | 21323.1 |
| hypothetical protein | CD58_RS08545 | Not Available | Positive | 1962340 - 1962633 | 11192.5 |
| l,d-transpeptidase family protein | CD58_RS08550 | Not Available | Positive | 1962869 - 1963840 | 34582.9 |
| outer membrane lipoprotei opri | CD58_RS08555 | Not Available | Negative | 1963964 - 1964215 | 8785.24 |
| gnat family n-acetyltransferase | CD58_RS08560 | Not Available | Positive | 1964850 - 1965131 | 10672.7 |
| 3-deoxy-7-phosphoheptulonate synthase | CD58_RS08565 | Not Available | Negative | 1965218 - 1966294 | 38985.7 |
| putative 2-dehydropantoate 2-reductase | CD58_RS08570 | Not Available | Positive | 1966564 - 1967517 | 33874.1 |
| 5'-nucleotidase | CD58_RS08575 | Not Available | Positive | 1967540 - 1968445 | 32925.8 |
| universal stress protein | CD58_RS08580 | Not Available | Positive | 1968542 - 1969042 | 18521.4 |
| hth-type transcriptional regulator cysb | CD58_RS08585 | Not Available | Positive | 1969153 - 1970127 | 36089.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
