Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | CD58_RS08490 | Not Available | Positive | 1950298 - 1951095 | 28699.5 |
| metal abc transporter atp-binding protein | CD58_RS08495 | Not Available | Negative | 1951101 - 1951322 | 8061.09 |
| methyl-accepting chemotaxis protein | CD58_RS08500 | Not Available | Negative | 1951607 - 1953088 | 52775.9 |
| tatd family hydrolase | CD58_RS08505 | Not Available | Negative | 1953296 - 1954105 | 30158.9 |
| transglycosylase slt domain-containing protein | CD58_RS08510 | Not Available | Positive | 1954340 - 1955761 | 52840.3 |
| doxx family protein | CD58_RS08515 | Not Available | Positive | 1955859 - 1956293 | 14768.4 |
| hypothetical protein | CD58_RS08520 | Not Available | Positive | 1957618 - 1957926 | 11274.7 |
| transcription elongation factor greb | CD58_RS08525 | Not Available | Negative | 1957948 - 1958445 | 18705.2 |
| abc transporter permease | CD58_RS08530 | Not Available | Negative | 1958480 - 1960984 | 89483.2 |
| abc transporter atp-binding protein | CD58_RS08535 | Not Available | Negative | 1960984 - 1961667 | 24474.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
