Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CD58_RS28835 | Not Available | Positive | 91676 - 91984 | 11387.5 |
| hypothetical protein | CD58_RS00430 | Not Available | Positive | 92085 - 92495 | 15084.9 |
| hypothetical protein | CD58_RS00435 | Not Available | Positive | 92748 - 93524 | 29093.5 |
| tir domain-containing protein | CD58_RS00440 | Not Available | Positive | 93930 - 94316 | 14378.2 |
| caspase domain-containing protein | CD58_RS28840 | Not Available | Positive | 94316 - 95302 | 35490.5 |
| hypothetical protein | CD58_RS31320 | Not Available | Negative | 95446 - 95865 | 16335.3 |
| duf6124 family protein | CD58_RS00450 | Not Available | Negative | 96124 - 96486 | 13188.7 |
| is256 family transposase | CD58_RS00455 | Not Available | Positive | 96934 - 98184 | 46841.4 |
| sco family protein | CD58_RS00460 | Not Available | Negative | 98915 - 99550 | 23096.2 |
| heme o synthase | CD58_RS00465 | Not Available | Negative | 99547 - 100446 | 32658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
