Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine permease | CD58_RS08440 | Not Available | Negative | 1937561 - 1938925 | 48171.2 |
| k(+)-transporting atpase subunit f | CD58_RS08445 | Not Available | Positive | 1939342 - 1939431 | 3160.07 |
| potassium-transporting atpase subunit kdpa | CD58_RS08450 | Not Available | Positive | 1939440 - 1941134 | 59789.7 |
| potassium-transporting atpase subunit kdpb | CD58_RS08455 | Not Available | Positive | 1941146 - 1943200 | 72034.5 |
| potassium-transporting atpase subunit kdpc | CD58_RS08460 | Not Available | Positive | 1943407 - 1943952 | 18680.8 |
| sensor histidine kinase | CD58_RS08465 | Not Available | Positive | 1944086 - 1946737 | 95649.1 |
| response regulator | CD58_RS08470 | Not Available | Positive | 1946786 - 1947484 | 25646.0 |
| patatin-like phospholipase family protein | CD58_RS08475 | Not Available | Negative | 1947660 - 1948697 | 38066.0 |
| hypothetical protein | CD58_RS08480 | Not Available | Positive | 1948907 - 1949197 | 10397.6 |
| chad domain-containing protein | CD58_RS08485 | Not Available | Positive | 1949305 - 1950066 | 28774.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
