Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | CD58_RS08410 | Not Available | Positive | 1930222 - 1931436 | 44287.8 |
| sugar transferase | CD58_RS08415 | Not Available | Positive | 1931436 - 1932032 | 22519.7 |
| neud/pglb/viob family sugar acetyltransferase | CD58_RS29095 | Not Available | Positive | 1932029 - 1932652 | 21161.6 |
| degt/dnrj/eryc1/strs family aminotransferase | CD58_RS29100 | Not Available | Positive | 1932700 - 1933878 | 43951.5 |
| metal abc transporter atp-binding protein | CD58_RS29105 | Not Available | Positive | 1933905 - 1934187 | 9915.73 |
| comea family dna-binding protein | CD58_RS08425 | Not Available | Positive | 1934321 - 1934656 | 11817.1 |
| hypothetical protein | CD58_RS31385 | Not Available | Positive | 1934760 - 1935371 | 21979.1 |
| gntr family transcriptional regulator | CD58_RS08430 | Not Available | Positive | 1935583 - 1936236 | 24711.7 |
| urea carboxylase-associated family protein | CD58_RS08435 | Not Available | Positive | 1936252 - 1937103 | 32117.0 |
| duf2897 family protein | CD58_RS29120 | Not Available | Negative | 1937273 - 1937440 | 6304.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
