Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycik family oxidoreductase | CD58_RS08260 | Not Available | Negative | 1895308 - 1896048 | 26236.4 |
| n-acetylmuramic acid 6-phosphate phosphatase mupp | CD58_RS08265 | Not Available | Negative | 1896199 - 1896870 | 24499.5 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | CD58_RS08270 | Not Available | Negative | 1896875 - 1897573 | 26045.6 |
| trz/atz family hydrolase | CD58_RS08275 | Not Available | Negative | 1897635 - 1898966 | 47640.3 |
| s-methyl-5-thioribose-1-phosphate isomerase | CD58_RS08280 | Not Available | Positive | 1899073 - 1900149 | 38654.6 |
| dna gyrase subunit a | CD58_RS08285 | Not Available | Positive | 1900595 - 1903258 | 98022.8 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | CD58_RS08290 | Not Available | Positive | 1903484 - 1904569 | 39824.4 |
| prephenate dehydratase | CD58_RS08295 | Not Available | Positive | 1904569 - 1905663 | 40318.5 |
| histidinol-phosphate transaminase | CD58_RS08300 | Not Available | Positive | 1905677 - 1906789 | 39610.3 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | CD58_RS08305 | Not Available | Positive | 1906818 - 1909025 | 77990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
