Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CD58_RS08210 | Not Available | Positive | 1883244 - 1884206 | 34982.3 |
| class ii fumarate hydratase | CD58_RS08215 | Not Available | Negative | 1884393 - 1885787 | 49127.8 |
| duf2059 domain-containing protein | CD58_RS08220 | Not Available | Positive | 1885979 - 1886506 | 18964.0 |
| bola family protein | CD58_RS08225 | Not Available | Positive | 1886519 - 1886818 | 11011.1 |
| rhodanese-related sulfurtransferase | CD58_RS08230 | Not Available | Positive | 1886976 - 1887917 | 35580.2 |
| dsba family protein | CD58_RS08235 | Not Available | Positive | 1887921 - 1888556 | 22871.4 |
| abc transporter atp-binding protein | CD58_RS08240 | Not Available | Positive | 1888549 - 1890375 | 66406.1 |
| eal domain-containing protein | CD58_RS08245 | Not Available | Positive | 1890567 - 1893026 | 90834.4 |
| tena family transcriptional regulator | CD58_RS08250 | Not Available | Positive | 1893072 - 1893875 | 30625.5 |
| ggdef domain-containing protein | CD58_RS08255 | Not Available | Negative | 1894019 - 1894945 | 34580.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
