Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfa family protein | CD58_RS08160 | Not Available | Positive | 1871395 - 1871727 | 12181.2 |
| carbon storage regulator csra | CD58_RS08165 | Not Available | Positive | 1871877 - 1872077 | 7309.91 |
| yheu family protein | CD58_RS08170 | Not Available | Negative | 1872066 - 1872293 | 8615.27 |
| osmoprotectant naggn system m42 family peptidase | CD58_RS08175 | Not Available | Negative | 1872513 - 1873700 | 42768.5 |
| n-acetylglutaminylglutamine synthetase | CD58_RS08180 | Not Available | Negative | 1873905 - 1875650 | 63839.0 |
| n-acetylglutaminylglutamine amidotransferase | CD58_RS08185 | Not Available | Negative | 1875654 - 1877426 | 65602.4 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | CD58_RS08190 | Not Available | Negative | 1877699 - 1879681 | 72457.3 |
| polyphosphate:amp phosphotransferase | CD58_RS08195 | Not Available | Positive | 1879832 - 1881355 | 59095.7 |
| thiolase family protein | CD58_RS08200 | Not Available | Positive | 1881458 - 1882642 | 42134.6 |
| duf6316 family protein | CD58_RS08205 | Not Available | Negative | 1882857 - 1883054 | 7485.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
