Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | CD58_RS08110 | Not Available | Positive | 1861282 - 1861737 | 16042.6 |
| heme lyase ccmf/nrfe family subunit | CD58_RS08115 | Not Available | Positive | 1861741 - 1863729 | 72429.9 |
| dsbe family thiol:disulfide interchange protein | CD58_RS08120 | Not Available | Positive | 1863726 - 1864262 | 20041.5 |
| cytochrome c-type biogenesis protein | CD58_RS08125 | Not Available | Positive | 1864259 - 1864732 | 17802.5 |
| c-type cytochrome biogenesis protein ccmi | CD58_RS08130 | Not Available | Positive | 1864725 - 1865927 | 43200.9 |
| hypothetical protein | CD58_RS08135 | Not Available | Positive | 1865942 - 1866349 | 14486.2 |
| polyamine aminopropyltransferase | CD58_RS08140 | Not Available | Positive | 1866606 - 1867481 | 32615.0 |
| lta synthase family protein | CD58_RS08145 | Not Available | Positive | 1867893 - 1869986 | 77568.0 |
| duf3309 family protein | CD58_RS29085 | Not Available | Negative | 1870049 - 1870201 | 5262.09 |
| sdr family oxidoreductase | CD58_RS08155 | Not Available | Positive | 1870522 - 1871337 | 29605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
