Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | CD58_RS08060 | Not Available | Positive | 1853910 - 1854701 | 28607.7 |
| chew domain-containing protein | CD58_RS08065 | Not Available | Positive | 1854798 - 1855670 | 31544.1 |
| chemotaxis protein chew | CD58_RS08070 | Not Available | Positive | 1855743 - 1856228 | 18002.5 |
| duf2802 domain-containing protein | CD58_RS08075 | Not Available | Positive | 1856229 - 1856624 | 14338.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | CD58_RS08080 | Not Available | Negative | 1856866 - 1857195 | 12179.3 |
| flagellar hook-length control protein flik | CD58_RS08085 | Not Available | Negative | 1857192 - 1858763 | 56119.7 |
| cytochrome c biogenesis heme-transporting atpase ccma | CD58_RS08090 | Not Available | Positive | 1858963 - 1859598 | 23180.2 |
| heme exporter protein ccmb | CD58_RS08095 | Not Available | Positive | 1859595 - 1860263 | 23112.7 |
| metal abc transporter atp-binding protein | CD58_RS08100 | Not Available | Positive | 1860358 - 1861112 | 27304.3 |
| heme exporter protein ccmd | CD58_RS08105 | Not Available | Positive | 1861109 - 1861285 | 6553.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
