Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CD58_RS00380 | Not Available | Positive | 83745 - 85055 | 47334.2 |
| trk system potassium transporter trka | CD58_RS00385 | Not Available | Positive | 85080 - 86453 | 49830.1 |
| tetratricopeptide repeat protein | CD58_RS00390 | Not Available | Positive | 86627 - 86938 | 11519.8 |
| arsr/smtb family transcription factor | CD58_RS00395 | Not Available | Positive | 87156 - 87458 | 10972.3 |
| zinc-dependent alcohol dehydrogenase family protein | CD58_RS00400 | Not Available | Positive | 87523 - 88497 | 34470.3 |
| antibiotic biosynthesis monooxygenase family protein | CD58_RS00405 | Not Available | Positive | 88530 - 88823 | 11163.2 |
| ferric reductase-like transmembrane domain-containing protein | CD58_RS00410 | Not Available | Positive | 89074 - 89721 | 23334.0 |
| histidine phosphatase family protein | CD58_RS00415 | Not Available | Positive | 89897 - 90529 | 23731.2 |
| hypothetical protein | CD58_RS00420 | Not Available | Positive | 90844 - 91125 | 9962.44 |
| hypothetical protein | CD58_RS00425 | Not Available | Positive | 91197 - 91439 | 8955.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
