Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-length control protein flik | CD58_RS07960 | Not Available | Positive | 1834188 - 1835552 | 46475.8 |
| flagellar basal body-associated protein flil | CD58_RS07965 | Not Available | Positive | 1835786 - 1836289 | 18152.5 |
| flagellar motor switch protein flim | CD58_RS07970 | Not Available | Positive | 1836299 - 1837267 | 36136.8 |
| flagellar motor switch protein flin | CD58_RS07975 | Not Available | Positive | 1837337 - 1837795 | 16269.2 |
| flagellar biosynthetic protein flio | CD58_RS07980 | Not Available | Positive | 1837823 - 1838236 | 14319.9 |
| flagellar type iii secretion system pore protein flip | CD58_RS07985 | Not Available | Positive | 1838236 - 1838985 | 27048.4 |
| flagellar biosynthesis protein fliq | CD58_RS07990 | Not Available | Positive | 1839009 - 1839278 | 9939.73 |
| flagellar biosynthetic protein flir | CD58_RS07995 | Not Available | Positive | 1839283 - 1840065 | 27992.7 |
| flagellar biosynthesis protein flhb | CD58_RS08000 | Not Available | Positive | 1840069 - 1841205 | 41810.7 |
| hypothetical protein | CD58_RS08005 | Not Available | Positive | 1841389 - 1842069 | 25776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
