Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent response regulator transcription factor fler | CD58_RS07910 | Not Available | Positive | 1824211 - 1825605 | 50297.0 |
| flagellar hook-basal body complex protein flie | CD58_RS07915 | Not Available | Positive | 1825813 - 1826139 | 11749.2 |
| flagellar basal-body ms-ring/collar protein flif | CD58_RS07920 | Not Available | Positive | 1826155 - 1827939 | 63433.3 |
| flagellar motor switch protein flig | CD58_RS07925 | Not Available | Positive | 1827932 - 1828951 | 36955.4 |
| flagellar assembly protein flih | CD58_RS07930 | Not Available | Positive | 1828959 - 1829804 | 31227.8 |
| flagellar protein export atpase flii | CD58_RS07935 | Not Available | Positive | 1829794 - 1831152 | 48590.1 |
| flagellar export protein flij | CD58_RS07940 | Not Available | Positive | 1831159 - 1831608 | 17315.5 |
| stas domain-containing protein | CD58_RS07945 | Not Available | Positive | 1831711 - 1832016 | 11268.3 |
| fused response regulator/phosphatase | CD58_RS07950 | Not Available | Positive | 1832022 - 1833725 | 62748.2 |
| hpt domain-containing protein | CD58_RS07955 | Not Available | Positive | 1833756 - 1834100 | 12846.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
