Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | CD58_RS07860 | Not Available | Positive | 1814775 - 1815701 | 32977.2 |
| motility associated factor glycosyltransferase family protein | CD58_RS07865 | Not Available | Positive | 1815786 - 1817078 | 47813.2 |
| hypothetical protein | CD58_RS07870 | Not Available | Positive | 1817075 - 1817344 | 9979.99 |
| flagellin domain-containing protein | CD58_RS07875 | Not Available | Positive | 1817597 - 1818448 | 29391.1 |
| flagellar protein flag | CD58_RS07880 | Not Available | Positive | 1818521 - 1818886 | 13005.5 |
| flagellar filament capping protein flid | CD58_RS07885 | Not Available | Positive | 1818969 - 1820405 | 48423.0 |
| flagellar export chaperone flis | CD58_RS07890 | Not Available | Positive | 1820539 - 1820934 | 14380.5 |
| hypothetical protein | CD58_RS07895 | Not Available | Positive | 1820945 - 1821241 | 10936.0 |
| sigma-54 dependent transcriptional regulator | CD58_RS07900 | Not Available | Positive | 1821411 - 1822886 | 55570.9 |
| sensor histidine kinase | CD58_RS07905 | Not Available | Positive | 1823015 - 1824205 | 43545.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
