Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | CD58_RS07710 | Not Available | Positive | 1778125 - 1778940 | 31343.5 |
| hd domain-containing protein | CD58_RS07715 | Not Available | Negative | 1779095 - 1779682 | 22052.1 |
| duf962 domain-containing protein | CD58_RS07720 | Not Available | Negative | 1779708 - 1780019 | 12178.8 |
| metal abc transporter atp-binding protein | CD58_RS07725 | Not Available | Positive | 1780341 - 1781400 | 39613.4 |
| trkh family potassium uptake protein | CD58_RS07730 | Not Available | Negative | 1781357 - 1782811 | 52943.1 |
| nad(p)h nitroreductase | CD58_RS07735 | Not Available | Positive | 1782982 - 1783545 | 20395.6 |
| amino acid aminotransferase | CD58_RS07740 | Not Available | Negative | 1783638 - 1784831 | 43021.6 |
| 4a-hydroxytetrahydrobiopterin dehydratase | CD58_RS07745 | Not Available | Negative | 1784831 - 1785187 | 13322.8 |
| phenylalanine 4-monooxygenase | CD58_RS07750 | Not Available | Negative | 1785288 - 1786073 | 30057.3 |
| sigma-54-dependent phenylalanine hydroxylase transcriptional regulator phhr | CD58_RS07755 | Not Available | Positive | 1786488 - 1788047 | 57038.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
