Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retention module-containing protein | CD58_RS07660 | Not Available | Positive | 1759247 - 1767073 | 261706.0 |
| yban family protein | CD58_RS07665 | Not Available | Negative | 1767338 - 1767733 | 14596.6 |
| yeca family protein | CD58_RS07670 | Not Available | Negative | 1767742 - 1768329 | 21887.6 |
| dna helicase recq | CD58_RS07675 | Not Available | Positive | 1768763 - 1770889 | 78920.2 |
| marr family transcriptional regulator | CD58_RS07680 | Not Available | Positive | 1771008 - 1771442 | 16278.9 |
| fimv/hubp family polar landmark protein | CD58_RS07685 | Not Available | Positive | 1771555 - 1773558 | 71092.7 |
| patatin-like phospholipase family protein | CD58_RS07690 | Not Available | Negative | 1773713 - 1775902 | 80789.2 |
| selt/selw/selh family protein | CD58_RS07695 | Not Available | Positive | 1775973 - 1776260 | 10693.7 |
| dmt family transporter | CD58_RS07700 | Not Available | Negative | 1776254 - 1777147 | 31188.2 |
| helix-turn-helix transcriptional regulator | CD58_RS07705 | Not Available | Negative | 1777241 - 1777990 | 26741.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
