Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine utilization regulator ptrr | CD58_RS07615 | Not Available | Positive | 1747403 - 1748296 | 32551.3 |
| pa1414 family protein | CD58_RS31595 | Not Available | Positive | 1748436 - 1748564 | 5089.26 |
| purine-cytosine permease family protein | CD58_RS07620 | Not Available | Negative | 1748699 - 1750210 | 53285.7 |
| yybh family protein | CD58_RS07625 | Not Available | Negative | 1750265 - 1750690 | 16059.7 |
| agmatinase | CD58_RS07630 | Not Available | Negative | 1750700 - 1751650 | 34122.3 |
| lysr family transcriptional regulator | CD58_RS07635 | Not Available | Positive | 1751999 - 1752892 | 33283.2 |
| pp_01542 | CD58_RS07640 | Not Available | Positive | 1752902 - 1753498 | Not Available |
| hlyd family type i secretion periplasmic adaptor subunit | CD58_RS07645 | Not Available | Negative | 1753657 - 1755021 | 49760.7 |
| type i secretion system permease/atpase | CD58_RS07650 | Not Available | Negative | 1755244 - 1757403 | 77840.6 |
| tolc family outer membrane protein | CD58_RS07655 | Not Available | Negative | 1757434 - 1758792 | 50366.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
