Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent nadh-azoreductase | CD58_RS07525 | Not Available | Positive | 1715198 - 1715797 | 21715.9 |
| atp-binding protein | CD58_RS07530 | Not Available | Positive | 1716193 - 1718055 | 68610.3 |
| carboxylate/amino acid/amine transporter | CD58_RS07535 | Not Available | Positive | 1718139 - 1719002 | 32076.2 |
| mechanosensitive ion channel family protein | CD58_RS07540 | Not Available | Negative | 1719113 - 1720411 | 48589.9 |
| dead/deah box helicase | CD58_RS07545 | Not Available | Positive | 1720607 - 1721953 | 49497.4 |
| hypothetical protein | CD58_RS07550 | Not Available | Negative | 1722192 - 1722464 | 9940.04 |
| sialidase family protein | CD58_RS07555 | Not Available | Positive | 1722879 - 1725386 | 90807.3 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | CD58_RS07560 | Not Available | Positive | 1725657 - 1727363 | 63620.9 |
| metal abc transporter atp-binding protein | CD58_RS31375 | Not Available | Positive | 1727387 - 1737966 | 360707.0 |
| duf6883 domain-containing protein | CD58_RS31655 | Not Available | Positive | 1738165 - 1738845 | 23693.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
