Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | CD58_RS07475 | Not Available | Positive | 1705624 - 1706235 | 22811.2 |
| anti-sigma factor family protein | CD58_RS07480 | Not Available | Positive | 1706229 - 1706465 | 9405.71 |
| opro/oprp family phosphate-selective porin | CD58_RS07485 | Not Available | Positive | 1706753 - 1708063 | 46765.6 |
| gnat family n-acetyltransferase | CD58_RS07490 | Not Available | Positive | 1708204 - 1709328 | 42428.2 |
| aquaporin z | CD58_RS07495 | Not Available | Negative | 1709344 - 1710033 | 23346.9 |
| abc transporter atp-binding protein | CD58_RS07500 | Not Available | Negative | 1710455 - 1712287 | 67507.4 |
| peptidylprolyl isomerase | CD58_RS07505 | Not Available | Negative | 1712372 - 1712935 | 20185.3 |
| alpha/beta fold hydrolase | CD58_RS07510 | Not Available | Negative | 1712940 - 1713743 | 30174.3 |
| lysr family transcriptional regulator | CD58_RS07515 | Not Available | Negative | 1713758 - 1714681 | 33982.8 |
| hypothetical protein | CD58_RS07520 | Not Available | Positive | 1714732 - 1715046 | 11450.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
