Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4160 domain-containing protein | CD58_RS07425 | Not Available | Positive | 1691766 - 1691996 | 8970.02 |
| duf2442 domain-containing protein | CD58_RS07430 | Not Available | Positive | 1691984 - 1692484 | 17901.5 |
| duf748 domain-containing protein | CD58_RS07435 | Not Available | Negative | 1692481 - 1693557 | 40623.0 |
| cysteine synthase a | CD58_RS07440 | Not Available | Positive | 1693695 - 1694669 | 34466.0 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | CD58_RS07445 | Not Available | Positive | 1694849 - 1695787 | 35707.2 |
| dmt family transporter | CD58_RS07450 | Not Available | Positive | 1696126 - 1696989 | 31035.9 |
| metal abc transporter atp-binding protein | CD58_RS07455 | Not Available | Negative | 1697110 - 1698017 | 32632.2 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | CD58_RS07460 | Not Available | Positive | 1698148 - 1699869 | 66089.8 |
| atp-dependent rna helicase hrpa | CD58_RS07465 | Not Available | Positive | 1700103 - 1704014 | 147597.0 |
| beta-ketoacyl-acp synthase iii | CD58_RS07470 | Not Available | Positive | 1704353 - 1705474 | 40622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
