Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | CD58_RS07375 | Not Available | Negative | 1681291 - 1683345 | 76318.6 |
| hypothetical protein | CD58_RS07380 | Not Available | Positive | 1683501 - 1684001 | 18782.2 |
| class ii glutamine amidotransferase | CD58_RS07385 | Not Available | Positive | 1684035 - 1684811 | 29023.3 |
| duf2937 family protein | CD58_RS07390 | Not Available | Positive | 1684824 - 1685366 | 20315.8 |
| mfs transporter | CD58_RS07395 | Not Available | Positive | 1685680 - 1686966 | 46568.4 |
| 5-oxoprolinase subunit pxpa | CD58_RS07400 | Not Available | Positive | 1687031 - 1687783 | 26846.0 |
| 5-oxoprolinase subunit pxpb | CD58_RS07405 | Not Available | Positive | 1687780 - 1688484 | 25520.8 |
| biotin-dependent carboxyltransferase family protein | CD58_RS07410 | Not Available | Positive | 1688481 - 1689401 | 32574.3 |
| vwa domain-containing protein | CD58_RS07415 | Not Available | Negative | 1689509 - 1690687 | 45647.6 |
| aaa family atpase | CD58_RS07420 | Not Available | Negative | 1690722 - 1691567 | 32235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
