Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-2-hydroxyacid dehydrogenase | CD58_RS07325 | Not Available | Positive | 1674182 - 1675114 | 34204.3 |
| nitroreductase family protein | CD58_RS07330 | Not Available | Negative | 1675315 - 1675908 | 21940.7 |
| ycgn family cysteine cluster protein | CD58_RS07335 | Not Available | Positive | 1676070 - 1676519 | 17161.2 |
| hypothetical protein | CD58_RS07340 | Not Available | Positive | 1676552 - 1677781 | 45579.7 |
| duf2892 domain-containing protein | CD58_RS07345 | Not Available | Negative | 1677907 - 1678284 | 13007.6 |
| rna methyltransferase | CD58_RS07350 | Not Available | Negative | 1678360 - 1678830 | 17282.8 |
| yajd family hnh nuclease | CD58_RS07355 | Not Available | Negative | 1679023 - 1679397 | 14133.5 |
| spermidine synthase | CD58_RS07360 | Not Available | Negative | 1679445 - 1680131 | 24321.5 |
| hypothetical protein | CD58_RS07365 | Not Available | Positive | 1680207 - 1680494 | 9527.78 |
| cyclic nucleotide-binding domain-containing protein | CD58_RS07370 | Not Available | Negative | 1680619 - 1681092 | 16761.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
