Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | CD58_RS07280 | Not Available | Negative | 1665321 - 1666133 | 30790.4 |
| yegp family protein | CD58_RS07285 | Not Available | Negative | 1666247 - 1666438 | 7231.57 |
| metal abc transporter atp-binding protein | CD58_RS30080 | Not Available | Positive | 1666605 - 1666700 | 3770.65 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | CD58_RS07290 | Not Available | Positive | 1666787 - 1667152 | 13152.0 |
| lysr family transcriptional regulator | CD58_RS07295 | Not Available | Negative | 1667156 - 1668088 | 34933.8 |
| glutamine synthetase family protein | CD58_RS07300 | Not Available | Positive | 1668606 - 1669988 | 50720.3 |
| phosphoethanolamine transferase | CD58_RS07305 | Not Available | Positive | 1670154 - 1671803 | 61109.1 |
| class i sam-dependent methyltransferase | CD58_RS07310 | Not Available | Positive | 1671873 - 1672514 | 23814.8 |
| ribonuclease d | CD58_RS07315 | Not Available | Positive | 1672636 - 1673769 | 42589.4 |
| ycgl domain-containing protein | CD58_RS07320 | Not Available | Positive | 1673766 - 1674059 | 11299.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
