Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | CD58_RS07125 | Not Available | Negative | 1636655 - 1637767 | 41184.5 |
| uracil-dna glycosylase | CD58_RS07130 | Not Available | Positive | 1637899 - 1638591 | 25784.0 |
| abrb family transcriptional regulator | CD58_RS07135 | Not Available | Negative | 1638700 - 1639737 | 37398.7 |
| tripartite tricarboxylate transporter permease | CD58_RS07140 | Not Available | Negative | 1639730 - 1641244 | 53086.8 |
| tripartite tricarboxylate transporter tctb family protein | CD58_RS07145 | Not Available | Negative | 1641246 - 1641707 | 16815.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CD58_RS07150 | Not Available | Negative | 1641763 - 1642740 | 34914.1 |
| response regulator | CD58_RS07155 | Not Available | Positive | 1643197 - 1643868 | 24628.8 |
| sensor histidine kinase | CD58_RS07160 | Not Available | Positive | 1643861 - 1645252 | 50801.1 |
| hdod domain-containing protein | CD58_RS07165 | Not Available | Negative | 1645293 - 1646114 | 30518.9 |
| ygfz/gcvt domain-containing protein | CD58_RS07170 | Not Available | Negative | 1646150 - 1647091 | 34038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
