Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine-rich cwc family protein | CD58_RS07075 | Not Available | Negative | 1624618 - 1624836 | 7657.29 |
| metal abc transporter atp-binding protein | CD58_RS07080 | Not Available | Negative | 1624829 - 1625440 | 22986.8 |
| allophanate hydrolase | CD58_RS07085 | Not Available | Negative | 1625756 - 1627534 | 63754.6 |
| urea carboxylase | CD58_RS07090 | Not Available | Negative | 1627557 - 1631237 | 133026.0 |
| urea amidolyase associated protein uaap2 | CD58_RS07095 | Not Available | Negative | 1631541 - 1632182 | 23534.0 |
| urea amidolyase associated protein uaap1 | CD58_RS07100 | Not Available | Negative | 1632194 - 1632919 | 26643.8 |
| abc transporter atp-binding protein | CD58_RS07105 | Not Available | Negative | 1632933 - 1633721 | 28730.0 |
| abc transporter permease | CD58_RS07110 | Not Available | Negative | 1633718 - 1634533 | 29890.9 |
| putative urea abc transporter substrate-binding protein | CD58_RS07115 | Not Available | Negative | 1634549 - 1635616 | 37817.2 |
| hypothetical protein | CD58_RS29060 | Not Available | Positive | 1636083 - 1636472 | 14996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
