Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding protein | CD58_RS07030 | Not Available | Positive | 1614395 - 1618180 | 126532.0 |
| type ii toxin-antitoxin system hicb family antitoxin | CD58_RS07035 | Not Available | Negative | 1618506 - 1618916 | 14735.6 |
| metal abc transporter atp-binding protein | CD58_RS29045 | Not Available | Negative | 1618957 - 1619133 | 6705.36 |
| lyse family translocator | CD58_RS07040 | Not Available | Negative | 1619426 - 1620055 | 22414.1 |
| lrp/asnc family transcriptional regulator | CD58_RS07045 | Not Available | Positive | 1620201 - 1620677 | 17247.0 |
| duf3077 domain-containing protein | CD58_RS07050 | Not Available | Negative | 1620792 - 1621091 | 11230.4 |
| hypothetical protein | CD58_RS07055 | Not Available | Positive | 1621692 - 1621886 | 7348.96 |
| Trna-gly | Not Available | Not Available | Positive | 1622456 - 1622529 | Not Available |
| alpha/beta fold hydrolase | CD58_RS07065 | Not Available | Negative | 1622694 - 1623578 | 33284.5 |
| pseudouridine synthase | CD58_RS07070 | Not Available | Negative | 1623890 - 1624582 | 26647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
