Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS00280 | Not Available | Negative | 60554 - 61702 | 40774.4 |
| duf5924 family protein | CD58_RS00285 | Not Available | Negative | 61755 - 62780 | 38390.5 |
| m16 family metallopeptidase | CD58_RS00290 | Not Available | Negative | 63082 - 64473 | 51922.3 |
| na/pi cotransporter family protein | CD58_RS00295 | Not Available | Negative | 64644 - 66302 | 59838.4 |
| terc family protein | CD58_RS00300 | Not Available | Negative | 66628 - 67395 | 28339.6 |
| citmhs family transporter | CD58_RS00305 | Not Available | Negative | 67458 - 68765 | 46408.1 |
| dopa 4,5-dioxygenase family protein | CD58_RS00310 | Not Available | Negative | 69138 - 69476 | 12692.4 |
| nad(p)-dependent oxidoreductase | CD58_RS00315 | Not Available | Positive | 69562 - 70221 | 23375.1 |
| choline sulfate utilization transcriptional regulator | CD58_RS00320 | Not Available | Negative | 70333 - 71283 | 35321.4 |
| choline-sulfatase | CD58_RS00325 | Not Available | Positive | 71398 - 72912 | 56972.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
