Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4917 family protein | CD58_RS06985 | Not Available | Negative | 1604338 - 1605357 | 38096.0 |
| l-threonine dehydrogenase | CD58_RS06990 | Not Available | Positive | 1605499 - 1606647 | 40000.4 |
| mfs transporter | CD58_RS06995 | Not Available | Negative | 1606644 - 1607807 | 40649.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CD58_RS07000 | Not Available | Negative | 1607820 - 1609055 | 44974.9 |
| fosfomycin resistance glutathione transferase | CD58_RS07005 | Not Available | Positive | 1609322 - 1609738 | 15499.4 |
| diguanylate cyclase domain-containing protein | CD58_RS07010 | Not Available | Positive | 1609903 - 1611252 | 49862.9 |
| duf4142 domain-containing protein | CD58_RS07015 | Not Available | Positive | 1611599 - 1612102 | 18215.8 |
| sdr family oxidoreductase | CD58_RS07020 | Not Available | Positive | 1612178 - 1613086 | 32252.5 |
| low affinity iron permease family protein | CD58_RS07025 | Not Available | Negative | 1613133 - 1613537 | 14997.3 |
| hypothetical protein | CD58_RS31200 | Not Available | Positive | 1613714 - 1613860 | 5252.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
