Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS06935 | Not Available | Positive | 1594550 - 1594857 | 11884.5 |
| ycei family protein | CD58_RS06940 | Not Available | Positive | 1595105 - 1595695 | 21565.0 |
| phospholipase d-like domain-containing protein | CD58_RS06945 | Not Available | Positive | 1595697 - 1596854 | 44826.2 |
| beta-glucosidase bglx | CD58_RS06950 | Not Available | Negative | 1596984 - 1599275 | 83344.0 |
| lema family protein | CD58_RS06955 | Not Available | Positive | 1599528 - 1600136 | 22774.3 |
| tpm domain-containing protein | CD58_RS06960 | Not Available | Positive | 1600261 - 1601016 | 25905.1 |
| tpm domain-containing protein | CD58_RS06965 | Not Available | Positive | 1601045 - 1601662 | 23258.4 |
| class i sam-dependent methyltransferase | CD58_RS06970 | Not Available | Positive | 1601743 - 1602957 | 45056.6 |
| dj-1/pfpi family protein | CD58_RS06975 | Not Available | Positive | 1603183 - 1603764 | 20618.8 |
| yegp family protein | CD58_RS06980 | Not Available | Positive | 1603849 - 1604193 | 12157.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
