Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS31195 | Not Available | Positive | 1561686 - 1561847 | 6230.61 |
| cytochrome c oxidase subunit ccom | CD58_RS31650 | Not Available | Positive | 1561994 - 1562110 | 4382.53 |
| inorganic phosphate transporter | CD58_RS06790 | Not Available | Negative | 1562355 - 1563830 | 52763.1 |
| hypothetical protein | CD58_RS06795 | Not Available | Negative | 1564195 - 1564395 | 7959.29 |
| pca regulon transcriptional regulator pcar | CD58_RS06800 | Not Available | Positive | 1564990 - 1565832 | 30674.9 |
| mfs transporter | CD58_RS06805 | Not Available | Positive | 1565991 - 1567337 | 47452.0 |
| coa transferase subunit a | CD58_RS06810 | Not Available | Positive | 1567636 - 1568493 | 31074.1 |
| coa-transferase subunit beta | CD58_RS06815 | Not Available | Positive | 1568490 - 1569272 | 27260.6 |
| 3-oxoadipyl-coa thiolase | CD58_RS06820 | Not Available | Positive | 1569269 - 1570474 | 41695.4 |
| protocatechuate 3,4-dioxygenase subunit beta | CD58_RS06825 | Not Available | Positive | 1570512 - 1571216 | 26333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
