Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imelysin family protein | CD58_RS06735 | Not Available | Negative | 1548590 - 1549933 | 46976.7 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS06740 | Not Available | Negative | 1550111 - 1552162 | 77293.3 |
| superoxide dismutase | CD58_RS06745 | Not Available | Negative | 1552467 - 1553063 | 22018.7 |
| lyse/argo family amino acid transporter | CD58_RS06750 | Not Available | Negative | 1553239 - 1553841 | 21280.7 |
| lysr family transcriptional regulator argp | CD58_RS06755 | Not Available | Positive | 1553938 - 1554837 | 32883.9 |
| nad-dependent epimerase/dehydratase family protein | CD58_RS06760 | Not Available | Positive | 1554924 - 1555916 | 36899.5 |
| atpase | CD58_RS06765 | Not Available | Positive | 1556045 - 1556920 | 31982.7 |
| cache domain-containing protein | CD58_RS06770 | Not Available | Positive | 1557160 - 1558002 | 30939.9 |
| rna polymerase-associated protein rapa | CD58_RS06775 | Not Available | Negative | 1558155 - 1561001 | 106516.0 |
| hypothetical protein | CD58_RS06780 | Not Available | Positive | 1561251 - 1561592 | 12895.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
