Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | CD58_RS06685 | Not Available | Positive | 1540277 - 1540810 | 19025.7 |
| gntp family permease | CD58_RS06690 | Not Available | Positive | 1540903 - 1542255 | 47187.8 |
| alanine transaminase | CD58_RS06695 | Not Available | Negative | 1542418 - 1543635 | 45136.5 |
| lyse family translocator | CD58_RS06700 | Not Available | Positive | 1543844 - 1544506 | 22993.5 |
| gyri-like domain-containing protein | CD58_RS06705 | Not Available | Positive | 1544584 - 1545072 | 18713.8 |
| gnat family n-acetyltransferase | CD58_RS06710 | Not Available | Negative | 1545204 - 1545689 | 17646.4 |
| yybh family protein | CD58_RS06715 | Not Available | Positive | 1545830 - 1546264 | 16418.6 |
| ycii family protein | CD58_RS06720 | Not Available | Positive | 1546332 - 1546676 | 12313.7 |
| srpbcc family protein | CD58_RS06725 | Not Available | Positive | 1546704 - 1547180 | 17988.5 |
| rna polymerase sigma factor | CD58_RS06730 | Not Available | Positive | 1547180 - 1548415 | 45990.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
