Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | CD58_RS06635 | Not Available | Negative | 1529910 - 1530854 | 34881.6 |
| long-chain-fatty-acid--coa ligase fadd2 | CD58_RS06640 | Not Available | Positive | 1531079 - 1532767 | 61610.9 |
| long-chain-fatty-acid--coa ligase fadd1 | CD58_RS06645 | Not Available | Positive | 1533131 - 1534822 | 61637.4 |
| hypothetical protein | CD58_RS06650 | Not Available | Negative | 1535032 - 1535409 | 14354.4 |
| csbd family protein | CD58_RS06655 | Not Available | Positive | 1535604 - 1535795 | 6485.64 |
| yihy/virulence factor brkb family protein | CD58_RS06660 | Not Available | Positive | 1535969 - 1536919 | 35036.7 |
| peptide deformylase | CD58_RS06665 | Not Available | Positive | 1536916 - 1537455 | 20015.2 |
| gnat family n-acetyltransferase | CD58_RS06670 | Not Available | Negative | 1537581 - 1538003 | 16088.6 |
| hypothetical protein | CD58_RS06675 | Not Available | Negative | 1538306 - 1538860 | 19882.2 |
| laci family dna-binding transcriptional regulator | CD58_RS06680 | Not Available | Negative | 1539030 - 1540061 | 37450.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
