Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | CD58_RS06585 | Not Available | Positive | 1520635 - 1522104 | 55061.9 |
| 6-phosphogluconolactonase | CD58_RS06590 | Not Available | Positive | 1522091 - 1522804 | 25186.5 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | CD58_RS06595 | Not Available | Positive | 1522822 - 1523487 | 23235.5 |
| aminotransferase class v-fold plp-dependent enzyme | CD58_RS06600 | Not Available | Negative | 1523738 - 1524925 | 44248.3 |
| duf3820 family protein | CD58_RS06605 | Not Available | Negative | 1524942 - 1525178 | 8872.89 |
| ferritin-like domain-containing protein | CD58_RS06610 | Not Available | Positive | 1525385 - 1525852 | 17268.2 |
| fusc family protein | CD58_RS06615 | Not Available | Positive | 1526169 - 1528169 | 72475.0 |
| duf1656 domain-containing protein | CD58_RS06620 | Not Available | Positive | 1528156 - 1528362 | 7435.59 |
| hlyd family secretion protein | CD58_RS06625 | Not Available | Positive | 1528372 - 1529235 | 31731.0 |
| maoc family dehydratase | CD58_RS06630 | Not Available | Negative | 1529396 - 1529866 | 17071.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
