Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CD58_RS06535 | Not Available | Positive | 1508628 - 1509359 | 27313.7 |
| atp-binding protein | CD58_RS06540 | Not Available | Positive | 1509349 - 1510818 | 54264.0 |
| age family epimerase/isomerase | CD58_RS06545 | Not Available | Positive | 1511066 - 1512325 | 46728.6 |
| abc transporter substrate-binding protein | CD58_RS06550 | Not Available | Positive | 1512442 - 1513743 | 45972.9 |
| carbohydrate abc transporter permease | CD58_RS06555 | Not Available | Positive | 1513886 - 1514794 | 33885.3 |
| carbohydrate abc transporter permease | CD58_RS06560 | Not Available | Positive | 1514787 - 1515632 | 30530.1 |
| abc transporter atp-binding protein | CD58_RS06565 | Not Available | Positive | 1515635 - 1516795 | 42240.5 |
| carbohydrate porin | CD58_RS06570 | Not Available | Positive | 1516926 - 1518272 | 49443.5 |
| d-hexose-6-phosphate mutarotase | CD58_RS06575 | Not Available | Positive | 1518565 - 1519419 | 32393.1 |
| murr/rpir family transcriptional regulator | CD58_RS06580 | Not Available | Negative | 1519578 - 1520438 | 31197.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
