Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CD58_RS00230 | Not Available | Negative | 50123 - 51913 | 65874.7 |
| sigma-54-dependent response regulator transcription factor algb | CD58_RS00235 | Not Available | Negative | 51924 - 53270 | 49587.4 |
| hypothetical protein | CD58_RS00240 | Not Available | Positive | 53707 - 53994 | 10755.0 |
| duf1328 domain-containing protein | CD58_RS28830 | Not Available | Positive | 54075 - 54239 | 5724.41 |
| inhibitor of vertebrate lysozyme family protein | CD58_RS00250 | Not Available | Positive | 54242 - 54706 | 17299.6 |
| glutamate/aspartate:proton symporter gltp | CD58_RS00255 | Not Available | Positive | 55413 - 56744 | 47813.9 |
| nucleoside recognition domain-containing protein | CD58_RS00260 | Not Available | Positive | 56950 - 58179 | 43115.1 |
| abc-type transport auxiliary lipoprotein family protein | CD58_RS00265 | Not Available | Negative | 58185 - 58817 | 22674.2 |
| mlad family protein | CD58_RS00270 | Not Available | Negative | 58814 - 59752 | 33518.9 |
| abc transporter atp-binding protein | CD58_RS00275 | Not Available | Negative | 59754 - 60557 | 28580.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
